Global transcriptome analysis of Bacillus cereus ATCC 14579 in response to silver nitrate stress

Table 1 Summary of RNA transcripts within intergenic regions of B. cereus ATCC14579 regulated in response to silver nitrate identified by genome based microarray

sRNA id	Start	End	Length (nucleotides)	Flanking gene id	Strand*	Expression pattern	Relative copy numbers	Primers
								Start	End
sRNA1	2840862	2840921	~60	BC2880/BC2881	<><	↓↑↓	54	2840862	2840921
sRNA2	1502573	1502638	~66	BC1553/BC1554	<><	↓↑↓	38	1502576	1502635
sRNA3	5024909	5024970	~62	BC5122/BC5123	<><	↓↑↓	36	5024910	5024969
sRNA4	3372000	3372189	~190	BC3408/BC3409	<><	↓↑↓	181	3372130	3372189
sRNA5	4261246	4261455	~210	BC4317/BC4318	<><	↓↑↓	41	4261395	4261454
sRNA6	4219221	4219336	~116	BC4271/BC4272	<><	↓↑↓	56	4219276	4219335
sRNA7	4040528	4040740	~213	BC4070/BC4071	<><	↓↑↓	169	4040679	4040738
sRNA8	525752	526136	~385	BC0547/BC0548	><>	↓↑↓	142	526073	526132
sRNA9	1106401	1106863	~463	BC1124/BC1125	><>	↓↑↓	44	1106797	1106856
sRNA10	1381925	1382221	~297	BC1419/BC1420	><>	↓↑↓	183	1382156	1382215
sRNA11	5372154	5372598	~445	BC5447/BC5448	<><	↓↑↓	42	5372540	5372599
sRNA12	4790423	4791589	~1167	BC4864/BC4865	<><	↓↑↓	19	4791428	4791487
sRNA13	3802805	3802907	~103	BC3824/BC3825	<><	↓↑↓	16	38028445	3802904
sRNA14	3121534	3121698	~165	BC3151/BC3152	<><	↓↑↓	12	3121639	3121698

*The middle symbol represents the sRNA gene, while the flanking symbol indicates the orientation of the adjacent genes, respectively. Genes present on the strand given in the B. cereus genome database are indicated by (>), and genes present on the complementary strand are indicated by (<).

ISSN: 1477-3155